A base class for all fitting classes. More...

#include <BCFitter.h>

Inheritance diagram for BCFitter:

Collaboration diagram for BCFitter:

Public Member Functions
Constructors and destructors
	BCFitter ()

	BCFitter (const char *name)

	~BCFitter ()

Member functions (get)
TGraph *	GetErrorBand ()

TH2D *	GetErrorBandXY () const

TH2D *	GetErrorBandXY_yellow (double level=.68, int nsmooth=0) const

std::vector< double >	GetErrorBand (double level) const

TGraph *	GetErrorBandGraph (double level1, double level2) const

TGraph *	GetFitFunctionGraph (const std::vector< double > &parameters)

TGraph *	GetFitFunctionGraph ()

TGraph *	GetFitFunctionGraph (const std::vector< double > &parameters, double xmin, double xmax, int n=1000)

void	FixDataAxis (unsigned int index, bool fixed)

bool	GetFixedDataAxis (unsigned int index) const

Member functions (set)
void	SetFillErrorBand (bool flag=true)

void	SetErrorBandHisto (TH2D *h)

void	UnsetFillErrorBand ()

void	SetFitFunctionIndexX (int index)

void	SetFitFunctionIndexY (int index)

void	SetFitFunctionIndices (int indexx, int indexy)

void	SetErrorBandContinuous (bool flag)

virtual double	FitFunction (const std::vector< double > &, const std::vector< double > &)

Member functions (miscellaneous methods)
int	ReadErrorBandFromFile (const char *file)

virtual int	Fit ()=0

virtual void	DrawFit (const char *options, bool flaglegend=false)=0

void	MCMCIterationInterface ()

void	MarginalizePreprocess ()

void	MarginalizePostprocess ()

void	FillErrorBand ()

Public Member Functions inherited from BCModel
	BCModel (const char *name="model")

	BCModel (const BCModel &bcmodel)

virtual	~BCModel ()

BCModel &	operator= (const BCModel &bcmodel)

const std::string &	GetName () const

double	GetModelAPrioriProbability () const

double	GetModelAPosterioriProbability () const

BCDataSet *	GetDataSet () const

BCDataPoint *	GetDataPointLowerBoundaries () const

BCDataPoint *	GetDataPointUpperBoundaries () const

double	GetDataPointLowerBoundary (unsigned int index) const

double	GetDataPointUpperBoundary (unsigned int index) const

bool	GetFlagBoundaries () const

unsigned	GetNDataPoints () const

BCDataPoint *	GetDataPoint (unsigned int index) const

void	SetName (const char *name)

void	SetModelAPrioriProbability (double probability)

void	SetModelAPosterioriProbability (double probability)

virtual int	AddParameter (BCParameter *parameter)

void	SetDataSet (BCDataSet *dataset)

void	SetSingleDataPoint (BCDataPoint *datapoint)

void	SetSingleDataPoint (BCDataSet *dataset, unsigned int index)

void	SetDataBoundaries (unsigned int index, double lowerboundary, double upperboundary, bool fixed=false)

void	SetDataPointLowerBoundaries (BCDataPoint *datasetlowerboundaries)

void	SetDataPointUpperBoundaries (BCDataPoint *datasetupperboundaries)

void	SetDataPointLowerBoundary (int index, double lowerboundary)

void	SetDataPointUpperBoundary (int index, double upperboundary)

int	SetPrior (int index, TF1 *f)

int	SetPrior (const char name, TF1 f)

int	SetPriorDelta (int index, double value)

int	SetPriorDelta (const char *name, double value)

int	SetPriorGauss (int index, double mean, double sigma)

int	SetPriorGauss (const char *name, double mean, double sigma)

int	SetPriorGauss (int index, double mean, double sigmadown, double sigmaup)

int	SetPriorGauss (const char *name, double mean, double sigmadown, double sigmaup)

int	SetPrior (int index, TH1 *h, bool flag=false)

int	SetPrior (const char name, TH1 h, bool flag=false)

int	SetPriorConstant (int index)

int	SetPriorConstant (const char *name)

int	SetPriorConstantAll ()

void	Copy (const BCModel &bcmodel)

double	APrioriProbability (const std::vector< double > &parameters)

virtual double	LogAPrioriProbability (const std::vector< double > &parameters)

virtual double	Likelihood (const std::vector< double > &params)

virtual double	LogLikelihood (const std::vector< double > &params)=0

double	ProbabilityNN (const std::vector< double > &params)

double	LogProbabilityNN (const std::vector< double > &parameters)

double	Probability (const std::vector< double > &parameter)

double	LogProbability (const std::vector< double > &parameter)

virtual double	SamplingFunction (const std::vector< double > &parameters)

double	Eval (const std::vector< double > &parameters)

virtual double	LogEval (const std::vector< double > &parameters)

virtual void	CorrelateDataPointValues (std::vector< double > &x)

double	GetPvalueFromChi2 (const std::vector< double > &par, int sigma_index)

double	GetPvalueFromKolmogorov (const std::vector< double > &par, int index)

double	GetPvalueFromChi2NDoF (std::vector< double > par, int sigma_index)

BCH1D *	CalculatePValue (std::vector< double > par, bool flag_histogram=false)

double	GetPValue ()

double	GetPValueNDoF ()

double	GetChi2NDoF ()

std::vector< double >	GetChi2Runs (int dataIndex, int sigmaIndex)

void	SetGoFNIterationsMax (int n)

void	SetGoFNIterationsRun (int n)

void	SetGoFNChains (int n)

double	HessianMatrixElement (const BCParameter parameter1, const BCParameter parameter2, std::vector< double > point)

void	PrintSummary ()

void	PrintResults (const char *file)

void	PrintShortFitSummary (int chi2flag=0)

void	PrintHessianMatrix (std::vector< double > parameters)

virtual double	CDF (const std::vector< double > &, int, bool)

Protected Attributes
TH2D *	fErrorBandXY

Protected Attributes inherited from BCModel
std::string	fName

double	fModelAPriori

double	fModelAPosteriori

BCDataSet *	fDataSet

BCDataPoint *	fDataPointLowerBoundaries

BCDataPoint *	fDataPointUpperBoundaries

std::vector< bool >	fDataFixedValues

double	fPValue

double	fChi2NDoF

double	fPValueNDoF

bool	flag_discrete

int	fGoFNIterationsMax

int	fGoFNIterationsRun

int	fGoFNChains

std::vector< TNamed * >	fPriorContainer

bool	fPriorConstantAll

std::vector< bool >	fPriorContainerConstant

std::vector< bool >	fPriorContainerInterpolate

Detailed Description

A base class for all fitting classes.

Author: Kevin Kröninger

Version: 1.0

Date: 08.2013 A base class for all fitting classes

Definition at line 27 of file BCFitter.h.

Constructor & Destructor Documentation

BCFitter::BCFitter ( )

The default constructor.

Definition at line 25 of file BCFitter.cxx.

BCFitter::BCFitter ( const char * name )

Constructor

Parameters

name	name of the model

Definition at line 39 of file BCFitter.cxx.

BCFitter::~BCFitter ( )

The default destructor.

Definition at line 53 of file BCFitter.cxx.

Member Function Documentation

virtual void BCFitter::DrawFit	(	const char *	options,
		bool	flaglegend = `false`
	)

pure virtual

Draw the fit in the current pad.

Implemented in BCEfficiencyFitter, BCHistogramFitter, and BCGraphFitter.

void BCFitter::FillErrorBand ( )

Fill error band histogram for curreent iteration. This method is called from MCMCIterationInterface()

Definition at line 102 of file BCFitter.cxx.

virtual int BCFitter::Fit ( )

pure virtual

Performs the fit.

Returns: An error code.

Implemented in BCEfficiencyFitter, BCHistogramFitter, and BCGraphFitter.

virtual double BCFitter::FitFunction	(	const std::vector< double > &	,
		const std::vector< double > &
	)

inlinevirtual

Defines a fit function.

Parameters

parameters	A set of parameter values
x	A vector of x-values

Returns: The value of the fit function at the x-values given a set of parameters

Reimplemented in BCEfficiencyFitter, BCHistogramFitter, and BCGraphFitter.

Definition at line 135 of file BCFitter.h.

TGraph* BCFitter::GetErrorBand ( )

inline

Returns: pointer to the error band

Definition at line 54 of file BCFitter.h.

std::vector< double > BCFitter::GetErrorBand ( double level ) const

Returns a vector of y-values at a certain probability level.

Parameters

level The level of probability

Returns: vector of y-values

Definition at line 159 of file BCFitter.cxx.

TH2D* BCFitter::GetErrorBandXY ( ) const

inline

const BCParameter * GetParameter(const char * name);

Returns: The 2-d histogram of the error band.

Definition at line 60 of file BCFitter.h.

void BCFitter::MarginalizePostprocess ( )

inline

Overloaded from BCIntegrate.

Definition at line 165 of file BCFitter.h.

void BCFitter::MarginalizePreprocess ( )

Overloaded from BCIntegrate.

Definition at line 69 of file BCFitter.cxx.

void BCFitter::MCMCIterationInterface ( )

Overloaded from BCEngineMCMC

Definition at line 58 of file BCFitter.cxx.

int BCFitter::ReadErrorBandFromFile ( const char * file )

Read

Definition at line 297 of file BCFitter.cxx.

void BCFitter::SetErrorBandContinuous ( bool flag )

Sets the error band flag to continuous function

Definition at line 352 of file BCFitter.cxx.

void BCFitter::SetErrorBandHisto ( TH2D * h )

inline

Sets errorband histogram

Definition at line 97 of file BCFitter.h.

void BCFitter::SetFillErrorBand ( bool flag = true )

inline

Turn on or off the filling of the error band during the MCMC run.

Parameters

flag	set to true for turning on the filling

Definition at line 92 of file BCFitter.h.

void BCFitter::SetFitFunctionIndexX ( int index )

inline

Sets index of the x values in function fits.

Parameters

index Index of the x values

Definition at line 109 of file BCFitter.h.

void BCFitter::SetFitFunctionIndexY ( int index )

inline

Sets index of the y values in function fits.

Parameters

index Index of the y values

Definition at line 115 of file BCFitter.h.

void BCFitter::SetFitFunctionIndices	(	int	indexx,
		int	indexy
	)

inline

Sets indices of the x and y values in function fits.

Parameters

indexx	Index of the x values
indexy	Index of the y values

Definition at line 122 of file BCFitter.h.

void BCFitter::UnsetFillErrorBand ( )

inline

Turn off filling of the error band during the MCMC run. This method is equivalent to SetFillErrorBand(false)

Definition at line 103 of file BCFitter.h.

Member Data Documentation

TH2D* BCFitter::fErrorBandXY

protected

The error band histogram

Definition at line 206 of file BCFitter.h.

The documentation for this class was generated from the following files:

/home/beaujean/workspace/bat/models/base/BCFitter.h
/home/beaujean/workspace/bat/models/base/BCFitter.cxx

Public Member Functions

Protected Attributes

Detailed Description

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation