This C++ version of BAT is still being maintained, but addition of new features is unlikely. Check out our new incarnation, BAT.jl, the Bayesian analysis toolkit in Julia. In addition to Metropolis-Hastings sampling, BAT.jl supports Hamiltonian Monte Carlo (HMC) with automatic differentiation, automatic prior-based parameter space transformations, and much more. See the BAT.jl documentation.
Results of performance testing for BAT version 0.4.1
Back to | overview for 0.4.1 | all versions |
Test "1d_binomial_4_6"
Results | |
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Status | good |
CPU time | 327.7 s |
Real time | 327.9 s |
Plots | 1d_binomial_4_6.ps |
Log | 1d_binomial_4_6.log |
Settings | |
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N chains | 10 |
N lag | 10 |
Convergence | true |
N iterations (pre-run) | 1000 |
N iterations (run) | 10000000 |
Subtest | Status | Target | Test | Uncertainty | Deviation [%] | Deviation [sigma] | Tol. (Good) | Tol. (Flawed) | Tol. (Bad) |
---|---|---|---|---|---|---|---|---|---|
correlation par 0 | off | 0 | 0.0628 | 0.006214 | - | -10.11 | 0.3 | 0.5 | 0.7 |
chi2 | good | 97 | 79.83 | 13.93 | -17.7 | 1.233 | 41.79 | 69.64 | 97.5 |
KS | good | 1 | 0.7849 | 0.95 | -21.51 | 0.2264 | 0.95 | 0.99 | 0.9999 |
mean | good | 0.625 | 0.6251 | 4.998e-05 | 0.01366 | -1.708 | 0.0001499 | 0.0002499 | 0.0003498 |
mode | good | 0.6667 | 0.675 | 0.03333 | 1.25 | -0.25 | 0.1 | 0.1667 | 0.2333 |
variance | good | 0.02604 | 0.02657 | 0.0033 | 2.027 | -0.16 | 0.0099 | 0.0165 | 0.0231 |
quantile10 | good | 0.4037 | 0.4038 | 0.03333 | 0.02412 | -0.002922 | 0.1 | 0.1667 | 0.2333 |
quantile20 | good | 0.4832 | 0.4832 | 0.03333 | 0.005757 | -0.0008345 | 0.1 | 0.1667 | 0.2333 |
quantile30 | good | 0.5414 | 0.5415 | 0.03333 | 0.01292 | -0.002098 | 0.1 | 0.1667 | 0.2333 |
quantile40 | good | 0.5908 | 0.5908 | 0.03333 | 0.01205 | -0.002136 | 0.1 | 0.1667 | 0.2333 |
quantile50 | good | 0.6359 | 0.636 | 0.03333 | 0.01406 | -0.002682 | 0.1 | 0.1667 | 0.2333 |
quantile60 | good | 0.6794 | 0.6795 | 0.03333 | 0.009031 | -0.001841 | 0.1 | 0.1667 | 0.2333 |
quantile70 | good | 0.7237 | 0.7238 | 0.03333 | 0.01529 | -0.003319 | 0.1 | 0.1667 | 0.2333 |
quantile80 | good | 0.7717 | 0.7718 | 0.03333 | 0.01247 | -0.002888 | 0.1 | 0.1667 | 0.2333 |
quantile90 | good | 0.8304 | 0.8305 | 0.03333 | 0.0159 | -0.003961 | 0.1 | 0.1667 | 0.2333 |
Subtest | Description |
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correlation par 0 | Calculate the auto-correlation among the points. |
chi2 | Calculate χ2 and compare with prediction for dof=number of bins with an expectation >= 10. Tolerance good: |χ2-E[χ2]| < 3 · (2 dof)1/2, Tolerance acceptable: |χ2-E[χ2]| < 5 · (2 dof)1/2, Tolerance bad: |χ2-E[χ2]| < 7 · (2 dof)1/2. |
KS | Calculate the Kolmogorov-Smirnov probability based on the ROOT implemention. Tolerance good: KS prob > 0.05, Tolerance acceptable: KS prob > 0.01 Tolerance bad: KS prob > 0.0001. |
mean | Compare sample mean, <x>, with expectation value of function, E[x]. Tolerance good: |<x> -E[x]| < 3 · (V[x]/n)1/2,Tolerance acceptable: |<x> -E[x]| < 5 · (V[x]/n)1/2,Tolerance bad: |<x> -E[x]| < 7 · (V[x]/n)1/2. |
mode | Compare mode of distribution with mode of the analytic function. Tolerance good: |x*-mode| < 3 · V[mode]1/2, Tolerance acceptable: |x*-mode| < 5 · V[mode]1/2 bin widths, Tolerance bad: |x*-mode| < 7 · V[mode]1/2. |
variance | Compare sample variance s2 of distribution with variance of function. Tolerance good: 3 · V[s2]1/2, Tolerance acceptable: 5 · V[s2]1/2, Tolerance bad: 7 · V[s2]1/2. |
quantile10 | Compare quantile of distribution from MCMC with the quantile of analytic function. Tolerance good: |q_{X}-E[q_{X}]|<3·V[q]1/2, Tolerance acceptable: |q_{X}-E[q_{X}]|<5·V[q]1/2, Tolerance bad: |q_{X}-E[q_{X}]|<7·V[q]1/2. |
quantile20 | Compare quantile of distribution from MCMC with the quantile of analytic function. Tolerance good: |q_{X}-E[q_{X}]|<3·V[q]1/2, Tolerance acceptable: |q_{X}-E[q_{X}]|<5·V[q]1/2, Tolerance bad: |q_{X}-E[q_{X}]|<7·V[q]1/2. |
quantile30 | Compare quantile of distribution from MCMC with the quantile of analytic function. Tolerance good: |q_{X}-E[q_{X}]|<3·V[q]1/2, Tolerance acceptable: |q_{X}-E[q_{X}]|<5·V[q]1/2, Tolerance bad: |q_{X}-E[q_{X}]|<7·V[q]1/2. |
quantile40 | Compare quantile of distribution from MCMC with the quantile of analytic function. Tolerance good: |q_{X}-E[q_{X}]|<3·V[q]1/2, Tolerance acceptable: |q_{X}-E[q_{X}]|<5·V[q]1/2, Tolerance bad: |q_{X}-E[q_{X}]|<7·V[q]1/2. |
quantile50 | Compare quantile of distribution from MCMC with the quantile of analytic function. Tolerance good: |q_{X}-E[q_{X}]|<3·V[q]1/2, Tolerance acceptable: |q_{X}-E[q_{X}]|<5·V[q]1/2, Tolerance bad: |q_{X}-E[q_{X}]|<7·V[q]1/2. |
quantile60 | Compare quantile of distribution from MCMC with the quantile of analytic function. Tolerance good: |q_{X}-E[q_{X}]|<3·V[q]1/2, Tolerance acceptable: |q_{X}-E[q_{X}]|<5·V[q]1/2, Tolerance bad: |q_{X}-E[q_{X}]|<7·V[q]1/2. |
quantile70 | Compare quantile of distribution from MCMC with the quantile of analytic function. Tolerance good: |q_{X}-E[q_{X}]|<3·V[q]1/2, Tolerance acceptable: |q_{X}-E[q_{X}]|<5·V[q]1/2, Tolerance bad: |q_{X}-E[q_{X}]|<7·V[q]1/2. |
quantile80 | Compare quantile of distribution from MCMC with the quantile of analytic function. Tolerance good: |q_{X}-E[q_{X}]|<3·V[q]1/2, Tolerance acceptable: |q_{X}-E[q_{X}]|<5·V[q]1/2, Tolerance bad: |q_{X}-E[q_{X}]|<7·V[q]1/2. |
quantile90 | Compare quantile of distribution from MCMC with the quantile of analytic function. Tolerance good: |q_{X}-E[q_{X}]|<3·V[q]1/2, Tolerance acceptable: |q_{X}-E[q_{X}]|<5·V[q]1/2, Tolerance bad: |q_{X}-E[q_{X}]|<7·V[q]1/2. |